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BIBM
2009
IEEE
164views Bioinformatics» more  BIBM 2009»
14 years 4 months ago
Differential Predictive Modeling for Racial Disparities in Breast Cancer
The primary objective of disparities research is to model the differences across multiple groups and identify the groups that behave significantly different from each other. Indep...
Indranil Palit, Chandan K. Reddy, Kendra L. Schwar...
BIBM
2009
IEEE
156views Bioinformatics» more  BIBM 2009»
14 years 4 months ago
Bayesian Classifier for Anchored Protein Sorting Discovery
—A typical cell has a size of only 10 µm while it contains about a billion proteins. Transportation of these proteins from their synthesis sites to their target locations within...
Fan Zhang, Jianjun Hu
BIBM
2009
IEEE
183views Bioinformatics» more  BIBM 2009»
14 years 4 months ago
Modeling Protein Interaction Networks with Answer Set Programming
—In this paper we propose the use of answer set programming (ASP) to model protein interaction networks. We argue that this declarative formalism rivals the popular boolean netwo...
Timur Fayruzov, Martine De Cock, Chris Cornelis, D...
BIBM
2009
IEEE
172views Bioinformatics» more  BIBM 2009»
14 years 4 months ago
Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
—A comprehensive understanding of cancer progression may shed light on genetic and molecular mechanisms of oncogenesis, and it may provide much needed information for effective d...
Yoon Soo Pyon, Jing Li
BIBE
2009
IEEE
185views Bioinformatics» more  BIBE 2009»
14 years 4 months ago
Anomaly-free Prediction of Gene Ontology Annotations Using Bayesian Networks
Gene and protein structural and functional annotations expressed through controlled terminologies and ontologies are paramount especially for the aim of inferring new biomedical k...
Marco Tagliasacchi, Marco Masseroli
ISBRA
2010
Springer
14 years 4 months ago
Fast Protein Structure Alignment
Yosi Shibberu, Allen Holder, Kyla Lutz
ICDT
2003
ACM
150views Database» more  ICDT 2003»
14 years 4 months ago
Bioinformatics Adventures in Database Research
Informatics has helped launch molecular biology into the genomic era. It appears certain that informatics will remain a major contributor to molecular biology in the post-genome er...
Jinyan Li, See-Kiong Ng, Limsoon Wong
BIBE
2003
IEEE
133views Bioinformatics» more  BIBE 2003»
14 years 4 months ago
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale
The tertiary (3D) structure of a protein contains the essential information for understanding the biological function of the protein at the molecular and cellular levels. Traditio...
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyl...