Sciweavers

CSB
2005
IEEE
147views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Accurate Prediction of Orthologous Gene Groups in Microbes
Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu
CSB
2005
IEEE
136views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Whole Genome Phylogeny Based on Clustered Signature String Composition
Peptide compositions constructed out of whole sets of protein sequences can be used as species signatures for phylogenetic analysis. To account for point mutations, an amino acid ...
Xiaomeng Wu, Guohui Lin, Xiu-Feng Wan, Dong Xu
CSB
2005
IEEE
124views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Discovering Functional Transcription Factor Binding from Superimposed Gene Networks
The availability of entire genome sequences, coupled with genome-wide studies of gene expression, offers promise for discovering new pathways along with their regulatory programs....
Matthew T. Weirauch, Joshua M. Stuart
CSB
2005
IEEE
145views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Classification Methods for HIV-1 Medicated Neuronal Damage
HIV-1-associated dementia (HAD) is the most devastating disease happened in the central nervous system of AIDS patients. Neuronal damage, the early indicator of HAD, under differe...
Mengjun Wang, Jialin Zheng, Zhengxin Chen, Yong Sh...
CSB
2005
IEEE
205views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Fractal Clustering for Microarray Data Analysis
DNA microarray experiments generate a substantial amount of information about global gene expression. Gene expression profiles can be represented as points in multi-dimensional sp...
Lu-Yong Wang, Ammaiappan Balasubramanian, Amit Cha...
CSB
2005
IEEE
136views Bioinformatics» more  CSB 2005»
14 years 5 months ago
An Algebraic Geometry Approach to Protein Structure Determination from NMR Data
Our paper describes the first provably-efficient algorithm for determining protein structures de novo, solely from experimental data. We show how the global nature of a certain ...
Lincong Wang, Ramgopal R. Mettu, Bruce Randall Don...
CSB
2005
IEEE
115views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Mining Protein Sequence Motifs Representing Common 3D Structures
Understanding the relationship between protein structure and its sequence is one of the most important tasks of current bioinformatics research. In this work, recurring protein se...
Wei Zhong, Gulsah Altun, Robert W. Harrison, Phang...
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
14 years 5 months ago
EigenPhenotypes: Towards an Algorithmic Framework for Phenotype Discovery
Studying the genetic control of molecular, anatomical and/or morphological phenotypes in model organisms is a powerful tool in the functional analysis of a gene. The goal of our r...
Alexander Vaughan, Rahul Singh, Ilmi Yoon, Megumi ...
CSB
2005
IEEE
223views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Automatic Protein Function Annotation through Candidate Ortholog Clusters from Incomplete Genomes
Annotation of protein function often arises in the context of partially complete genomes but is not adequately addressed. We present an annotation method by extracting ortholog cl...
Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muc...
CSB
2005
IEEE
151views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Lossless Compression of DNA Microarray Images
Microarray experiments are characterized by a massive amount of data, usually in the form of an image. Based on the nature of microarray images, we consider the microarray in term...
Yong Zhang, Rahul Parthe, Donald A. Adjeroh