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CSB
2005
IEEE
161views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Data Integration in the Mouse Genome Informatics (MGI) Database
The Mouse Genome Informatics (MGI) Database at The Jackson Laboratory provides a comprehensive public resource about the laboratory mouse. MGI curated data types include gene repr...
Donnie Qi, Judith A. Blake, James A. Kadin, Joel E...
CSB
2005
IEEE
210views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Problem Solving Environment Approach to Integrating Diverse Biological Data Sources
Scientists face an ever-increasing challenge in investigating biological systems with high throughput experimental methods such as mass spectrometry and gene arrays because of the...
Eric G. Stephan, Kyle R. Klicker, Mudita Singhal, ...
CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Biological Pathway Prediction from Multiple Data Sources Using Iterative Bayesian Updating
There is a diversity of functional genomics data, such as gene expression data from microarray experiments, phenotypic data from gene deletion experiments, protein-protein interac...
Corey Powell, Joshua M. Stuart
CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Investigation into Biomedical Literature Classification Using Support Vector Machines
Specific topic search in the PubMed Database, one of the most important information resources for scientific community, presents a big challenge to the users. The researcher typic...
Nalini Polavarapu, Shamkant B. Navathe, Ramprasad ...
CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Choosing SNPs Using Feature Selection
A major challenge for genomewide disease association studies is the high cost of genotyping large number of single nucleotide polymorphisms (SNP). The correlations between SNPs, h...
Tu Minh Phuong, Zhen Lin, Russ B. Altman
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fa...
CSB
2005
IEEE
124views Bioinformatics» more  CSB 2005»
14 years 5 months ago
Identifying Local Gene Expression Patterns in Biomolecular Networks
This study is aimed at elucidating putative transcription regulators (TRs) responsible for the observed differential expression pattern. Combined direct promoter binding and indir...
Andrey Y. Sivachenko, Anton Yuryev, Nikolai Darase...
CSB
2005
IEEE
110views Bioinformatics» more  CSB 2005»
14 years 5 months ago
A Topological Measurement for Weighted Protein Interaction Network
High-throughput methods for detecting protein-protein interactions (PPI) have given researchers an initial global picture of protein interactions on a genomic scale. The usefulnes...
Pengjun Pei, Aidong Zhang