The abundance of information provided by completely sequenced genomes de nes a starting point for new insights in the multilevel organization of organisms and their evolution. At ...
We consider the problem of identifying common three-dimensional substructures between proteins. Our method is based on comparing the shape of the α-carbon backbone structures of ...
L. Paul Chew, Daniel P. Huttenlocher, Klara Kedem,...
An important goal in bioinformatics is determining the homology and function of proteins from their sequences. Pairwise sequence similarity algorithms are often employed for this ...
Abstract. We look at some sources of insecurity and difficulty in reasoning about partially ordered runs of distributed ASMs, and propose some techniques to facilitate such reasoni...
Abstract. The Abstract State Machines (ASM) methodology is a methodology for formally specifying computing systems. We use the ASM methodology to give the dynamic semantics of the ...