Sciweavers

RECOMB
2000
Springer
13 years 11 months ago
A compression algorithm for DNA sequences and its applications in genome comparison
We present a lossless compression algorithm, GenCompress, for genetic sequences, based on searching for approximate repeats. Our algorithm achieves the best compression ratios for...
Xin Chen, Sam Kwong, Ming Li
RECOMB
2000
Springer
13 years 11 months ago
Human and mouse gene structure: comparative analysis and application to exon prediction
Serafim Batzoglou, Lior Pachter, Jill P. Mesirov, ...
RECOMB
2000
Springer
13 years 11 months ago
Notung: dating gene duplications using gene family trees
Kevin Chen, Dannie Durand, Martin Farach-Colton
RECOMB
2000
Springer
13 years 11 months ago
Tissue classification with gene expression profiles
Constantly improving gene expression profiling technologies are expected to provide understanding and insight into cancer related cellular processes. Gene expression data is also
Amir Ben-Dor, Laurakay Bruhn, Nir Friedman, Iftach...
JOBIM
2000
13 years 11 months ago
InterDB, a Prediction-Oriented Protein Interaction Database for C. elegans
Protein-protein interactions are critical to many biological processes, extending from the formation of cellular macromolecular structures and enzymatic complexes to the regulation...
Nicolas Thierry-Mieg, Laurent Trilling
JOBIM
2000
13 years 11 months ago
Can We Have Confidence in a Tree Representation?
Abstract. A tree representation distance method, applied to any dissimilarity array, always gives a valued tree, even if the tree model is not appropriate. In the first part, we pr...
Alain Guénoche, Henri Garreta
CIBCB
2006
IEEE
13 years 11 months ago
Efficient Probe Selection in Microarray Design
Abstract-- The DNA microarray technology, originally developed to measure the level of gene expression, had become one of the most widely used tools in genomic study. Microarrays h...
Leszek Gasieniec, Cindy Y. Li, Paul Sant, Prudence...
RECOMB
2010
Springer
13 years 11 months ago
MoGUL: Detecting Common Insertions and Deletions in a Population
Abstract. While the discovery of structural variants in the human population is ongoing, most methods for this task assume that the genome is sequenced to high coverage (e.g. 40x),...
Seunghak Lee, Eric Xing, Michael Brudno
CIBCB
2007
IEEE
13 years 11 months ago
Hybrid Architecture for Accelerating DNA Codeword Library Searching
-- A large and reliable DNA codeword library is the key to the success of DNA based computing. Searching for the set of reliable DNA codewords is an NP-hard problem, which can take...
Qinru Qiu, Daniel J. Burns, Qing Wu, Prakash Mukre