APBC 2007 | Sciweavers

25

APBC
2004

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A Dihedral Angle Database of Short Sub-sequences for Protein Structure Prediction

14 years 1 months ago

Protein structure prediction is considered to be the holy grail of bioinformatics. Ab initio and homology modelling are two important groups of methods used in protein structure p...

Saravanan Dayalan, Savitri Bevinakoppa, Heiko Schr...

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43

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APBC
2004

107views Bioinformatics» more APBC 2004»

An Empirical Bayes Adjustment to Multiple p-values for the Detection of Differentially Expressed Genes in Microarray Experiments

14 years 1 months ago

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In recent microarray experiments thousands of gene expressions are simultaneously tested in comparing samples (e.g., tissue types or experimental conditions). Application of a sta...

Somnath Datta, Susmita Datta

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27

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APBC
2004

108views Bioinformatics» more APBC 2004»

Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences

14 years 1 months ago

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In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...

Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...

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38

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APBC
2004

138views Bioinformatics» more APBC 2004»

Whole-Genome Functional Classification of Genes by Latent Semantic Analysis on Microarray Data

14 years 1 months ago

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Quantitative simultaneous monitoring of the expression levels of thousands of genes under various experimental conditions is now possible using microarray experiments. The resulti...

See-Kiong Ng, Zexuan Zhu, Yew-Soon Ong

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17

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APBC
2004

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Classification Comparison of Prediction of Solvent Accessibility From Protein Sequences

14 years 1 months ago

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Huiling Chen, Huan-Xiang Zhou, Xiaohua Hu, Illhoi ...

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29

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APBC
2004

122views Bioinformatics» more APBC 2004»

Integrating Biopathway Databases for Large-scale Modeling and Simulation

14 years 1 months ago

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Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...

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40

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APBC
2004

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Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type 1

14 years 1 months ago

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Mutation in HIV-1 is extremely rapid, a consequence of a low-fidelity viral reverse transcription process. The envelope gene has been shown to accumulate substitutions at a rate o...

Peter L. Meintjes, Allen G. Rodrigo

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30

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APBC
2004

70views Bioinformatics» more APBC 2004»

Variable-length Intervals in Homology Search

14 years 1 months ago

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Fast, accurate, and scalable search techniques for homology searching of large genomic collections are becoming an increasingly important requirement as genomic sequence collectio...

Abhijit Chattaraj, Hugh E. Williams

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31

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APBC
2004

132views Bioinformatics» more APBC 2004»

Identifying Character Non-Independence in Phylogenetic Data Using Data Mining Techniques

14 years 1 months ago

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Undiscovered relationships in a data set may confound analyses, particularly those that assume data independence. Such problems occur when characters used for phylogenetic analyse...

Anne M. Maglia, Jennifer L. Leopold, Venkat Ram Gh...

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28

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APBC
2004

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Phylogenetic Trees: An Information Visualisation Perspective

14 years 1 months ago