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    BIOINFORMATICS
    2011
    207views Artificial Intelligence» more  BIOINFORMATICS 2011»
    TimeTree2: species divergence times on the iPhone
    12 years 10 months ago
    TimeTree2: species divergence times on the iPhone
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    Sudhir Kumar, S. Blair Hedges
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    BIOINFORMATICS
    2011
    209views Artificial Intelligence» more  BIOINFORMATICS 2011»
    The strength of chemical linkage as a criterion for pruning metabolic graphs
    12 years 10 months ago
    The strength of chemical linkage as a criterion for pruning metabolic graphs
    Download  www.cs.rice.edu
    Wanding Zhou, Luay Nakhleh
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    BIOINFORMATICS
    2011
    202views Artificial Intelligence» more  BIOINFORMATICS 2011»
    Hidden conformations in protein structures
    12 years 10 months ago
    Hidden conformations in protein structures
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    Haim Ashkenazy, Ron Unger, Yossef Kliger
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    BIOINFORMATICS
    2011
    198views Artificial Intelligence» more  BIOINFORMATICS 2011»
    Automatic 3D neuron tracing using all-path pruning
    12 years 10 months ago
    Automatic 3D neuron tracing using all-path pruning
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    Hanchuan Peng, Fuhui Long, Gene Myers
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    BIOINFORMATICS
    2011
    222views Artificial Intelligence» more  BIOINFORMATICS 2011»
    A method for probing the mutational landscape of amyloid structure
    12 years 10 months ago
    A method for probing the mutational landscape of amyloid structure
    Download  web.wi.mit.edu
    Motivation: Proteins of all kinds can self-assemble into highly ordered β-sheet aggregates known as amyloid fibrils, important both biologically and clinically. However, the spe...
    Charles W. O'Donnell, Jérôme Waldisp&...
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    BIOINFORMATICS
    2011
    178views Artificial Intelligence» more  BIOINFORMATICS 2011»
    Mapping ancestral genomes with massive gene loss: A matrix sandwich problem
    12 years 10 months ago
    Mapping ancestral genomes with massive gene loss: A matrix sandwich problem
    Download  www.cecm.sfu.ca
    Haris Gavranovic, Cedric Chauve, Jérô...
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    BIOINFORMATICS
    2011
    210views Artificial Intelligence» more  BIOINFORMATICS 2011»
    Construction of co-complex score matrix for protein complex prediction from AP-MS data
    12 years 10 months ago
    Construction of co-complex score matrix for protein complex prediction from AP-MS data
    Download  www.ntu.edu.sg
    Zhipeng Xie, Chee Keong Kwoh, Xiaoli Li, Min Wu
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    BIOINFORMATICS
    2011
    161views Artificial Intelligence» more  BIOINFORMATICS 2011»
    RuleBender: a visual interface for rule-based modeling
    12 years 10 months ago
    RuleBender: a visual interface for rule-based modeling
    Download  dl.dropbox.com
    Wen Xu, Adam M. Smith, James R. Faeder, G. Elisabe...
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    BIOINFORMATICS
    2011
    355views Artificial Intelligence» more  BIOINFORMATICS 2011»
    ProDy: Protein Dynamics Inferred from Theory and Experiments
    12 years 10 months ago
    ProDy: Protein Dynamics Inferred from Theory and Experiments
    Download  www.ccbb.pitt.edu
    Summary: We developed a Python package, ProDy, for structurebased analysis of protein dynamics. ProDy allows for quantitative characterization of structural variations in heteroge...
    Ahmet Bakan, Lidio M. Meireles, Ivet Bahar
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    BIOINFORMATICS
    2011
    212views Artificial Intelligence» more  BIOINFORMATICS 2011»
    RINQ: Reference-based Indexing for Network Queries
    12 years 10 months ago
    RINQ: Reference-based Indexing for Network Queries
    Download  www.cise.ufl.edu
    We consider the problem of similarity queries in biological network databases. Given a database of networks, similarity query returns all the database networks whose similarity (i...
    Günhan Gülsoy, Tamer Kahveci
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