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WABI
2001
Springer
162views Bioinformatics» more  WABI 2001»
14 years 4 months ago
A Simple Hyper-Geometric Approach for Discovering Putative Transcription Factor Binding Sites
A central issue in molecular biology is understanding the regulatory mechanisms that control gene expression. The recent flood of genomic and postgenomic data opens the way for co...
Yoseph Barash, Gill Bejerano, Nir Friedman
DNA
2001
Springer
14 years 4 months ago
Towards Optimization of PCR Protocol in DNA Computing
Satoshi Kashiwamura, Masashi Nakatsugawa, Masahito...
DNA
2001
Springer
14 years 4 months ago
The Fidelity of the Tag-Antitag System
In the universal DNA chip method, target RNAs are mapped onto a set of DNA tags. Parallel hybridization of these tags with an indexed, complementary antitag array then provides an ...
John A. Rose, Russell J. Deaton, Masami Hagiya, Ak...
DNA
2001
Springer
125views Bioinformatics» more  DNA 2001»
14 years 4 months ago
PNA-mediated Whiplash PCR
The directed evolution of proteins, using an in vitro domainal shuffling strategy was proposed in (J. Kolkman and W. Stemmer, Nat. Biotech. 19, 423 (2001). Due to backhybridization...
John A. Rose, Russell J. Deaton, Masami Hagiya, Ak...
DNA
2001
Springer
100views Bioinformatics» more  DNA 2001»
14 years 4 months ago
Experimental Construction of Very Large Scale DNA Databases with Associative Search Capability
John H. Reif, Thomas H. LaBean, Michael Pirrung, V...
DNA
2001
Springer
14 years 4 months ago
Solving Knapsack Problems in a Sticker Based Model
Mario J. Pérez-Jiménez, Fernando San...
DNA
2001
Springer
164views Bioinformatics» more  DNA 2001»
14 years 4 months ago
A Clause String DNA Algorithm for SAT
A DNA algorithm for SAT, the satisfiability of propositional formulae, is presented where the number of separation steps is given by the number of clauses of the instance. This re...
Vincenzo Manca, Claudio Zandron
DNA
2001
Springer
139views Bioinformatics» more  DNA 2001»
14 years 4 months ago
DNA Computing in Microreactors
Abstract. The goal of this research is to improve the programmability of DNA-based computers. Novel clockable microreactors can be connected in various ways to solve combinatorial ...
Danny van Noort, Frank-Ulrich Gast, John S. McCask...
DNA
2001
Springer
14 years 4 months ago
DNA Starts to Learn Poker
DNA is used to implement a simplified version of poker. Strategies are evolved that mix bluffing with telling the truth. The essential features are (1) to wait your turn, (2) to de...
David Harlan Wood, Hong Bi, Steven Orla Kimbrough,...
CSB
2002
IEEE
109views Bioinformatics» more  CSB 2002»
14 years 4 months ago
Towards Automatic Clustering of Protein Sequences
Analyzing protein sequence data becomes increasingly important recently. Most previous work on this area has mainly focused on building classification models. In this paper, we i...
Jiong Yang, Wei Wang 0010