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BIBM
2007
IEEE
149views Bioinformatics» more  BIBM 2007»
13 years 11 months ago
An Algorithm for Assigning Unique Keys to Metabolic Pathways
Different databases of metabolic pathways assign pathways different keys. For this reason, it is difficult to automatically compare pathways across databases. We introduce an algo...
Fang Fang, Robert L. Grossman, Xiangjun Liu
BIBM
2007
IEEE
13 years 11 months ago
Multi-topic Aspects in Clinical Text Classification
This paper investigates multi-topic aspects in automatic classification of clinical free text. In many practical situations, we need to deal with documents overlapping with multip...
Yutaka Sasaki, Brian Rea, Sophia Ananiadou
BIBM
2007
IEEE
139views Bioinformatics» more  BIBM 2007»
13 years 11 months ago
Automatic Identification of Temporal Sequences in Chewing Sounds
Chewing is an essential part of food intake. The analysis and detection of food patterns is an important component of an automatic dietary monitoring system. However chewing is a t...
Oliver Amft, Martin Kusserow, Gerhard Tröster
BIBE
2007
IEEE
122views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
A PQRM-based PACS System for Advanced Medical Services under Grid Environment
Yong-Jie Ni, Chan-Hyun Youn, Byoung-Jin Kim, Young...
BIBE
2007
IEEE
167views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Assessing the Performance of Macromolecular Sequence Classifiers
Machine learning approaches offer some of the most cost-effective approaches to building predictive models (e.g., classifiers) in a broad range of applications in computational bio...
Cornelia Caragea, Jivko Sinapov, Vasant Honavar, D...
BIBE
2007
IEEE
127views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Gene Selection via Matrix Factorization
The recent development of microarray gene expression techniques have made it possible to offer phenotype classification of many diseases. However, in gene expression data analysis...
Fei Wang, Tao Li
BIBE
2007
IEEE
120views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Quality Assessment of Affymetrix GeneChip Data using the EM Algorithm and a Naive Bayes Classifier
Recent research has demonstrated the utility of using supervised classification systems for automatic identification of low quality microarray data. However, this approach requires...
Brian E. Howard, Beate Sick, Imara Perera, Yang Ju...
BIBE
2007
IEEE
129views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Statistial Analysis of nucleosome occupancy and histone modification data
Abstract-- In eukaryotic cells, genomic DNAs wrap around beadlike molecules, called nucleosomes, so as to pack more compactly in the nucleus of the cell. The nucleosome is made up ...
Guo-Cheng Yuan, Jun S. Liu
BIBE
2007
IEEE
141views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Graph and Topological Structure Mining on Scientific Articles
In this paper, we investigate a new approach for literature mining. We use frequent subgraph mining, and its generalization topological structure mining, for finding interesting re...
Fan Wang, Ruoming Jin, Gagan Agrawal, Helen Piontk...
BIBE
2007
IEEE
159views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
Non-negative Tensor Factorization Based on Alternating Large-scale Non-negativity-constrained Least Squares
Non-negative matrix factorization (NMF) and non-negative tensor factorization (NTF) have attracted much attention and have been successfully applied to numerous data analysis probl...
Hyunsoo Kim, Haesun Park, Lars Eldén