BIBM
2008
IEEE
14 years 6 months ago
2008
IEEE
Abstract—Biological clock, a self sustaining oscillation widely discovered in many species, is important to determine many biological activities, for example, the sleep-wake cycl...
BIBM
2008
IEEE
14 years 6 months ago
2008
IEEE
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
: If we consider the regulatory networks used in systems biology (especially in neural and genetic networks), we observe certain regularities in their architecture, namely the occu...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uniï...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
—The post-genomic era is characterized by the rapid data accumulation leading to unwieldy and large volumes of biological data. The proteomics results (large sets of identified p...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
—The Mouse Resource Browser MRB (http://bioit.fleming.gr/mrb) is an easy-to-use database for searching and retrieving mouse resource information. Currently, MRB hosts a list of 2...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
—This paper presents a study on polyadenylation site prediction in mRNA sequences. We describe a method, called PolyA-EP, that we developed for predicting polyadenylation sites a...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
— Recent studies in the field of molecular imaging have demonstrated the need for PET probes capable of imaging very weak activity distributions. Over this range of applications ...
BIBE
2008
IEEE
14 years 6 months ago
2008
IEEE
— Heterogeneous genome-wide data sources capture information on various aspects of complex biological systems. For instance, transcriptome, interactome and phenome-level informat...