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BMCBI
2006
137views more  BMCBI 2006»
13 years 7 months ago
INTEGRATOR: interactive graphical search of large protein interactomes over the Web
Background: The rapid growth of protein interactome data has elevated the necessity and importance of network analysis tools. However, unlike pure text data, network search spaces...
Aaron N. Chang, Jason McDermott, Zachary Frazier, ...
BMCBI
2007
133views more  BMCBI 2007»
13 years 7 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
ESAW
2004
Springer
14 years 24 days ago
T-Compound Interaction and Overhearing Agents
Overhearing is an indirect interaction type that enacts agents to listen to direct interactions among other agents without taking explicit part in the exchanges. In this paper, we ...
Eric Platon, Nicolas Sabouret, Shinichi Honiden
RECOMB
2007
Springer
14 years 1 months ago
Network Legos: Building Blocks of Cellular Wiring Diagrams
Publicly-available data sets provide detailed and large-scale information on multiple types of molecular interaction networks in a number of model organisms. These multi-modal univ...
T. M. Murali, Corban G. Rivera
ECML
2007
Springer
14 years 1 months ago
On Phase Transitions in Learning Sparse Networks
In this paper we study the identification of sparse interaction networks as a machine learning problem. Sparsity means that we are provided with a small data set and a high number...
Goele Hollanders, Geert Jan Bex, Marc Gyssens, Ron...