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    JCB
    2002
    116views more  JCB 2002»
    A Novel Approach to Remote Homology Detection: Jumping Alignments
    14 years 4 days ago
    A Novel Approach to Remote Homology Detection: Jumping Alignments
    Download  compdiag.molgen.mpg.de
    We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...
    Rainer Spang, Marc Rehmsmeier, Jens Stoye
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    JCB
    2002
    104views more  JCB 2002»
    Learning Gene Functional Classifications from Multiple Data Types
    14 years 4 days ago
    Learning Gene Functional Classifications from Multiple Data Types
    Download  noble.gs.washington.edu
    Paul Pavlidis, Jason Weston, Jinsong Cai, William ...
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    JCB
    2002
    61views more  JCB 2002»
    Mining Protein Sequences for Motifs
    14 years 4 days ago
    Mining Protein Sequences for Motifs
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    Giri Narasimhan, Changsong Bu, Yuan Gao, Xuning Wa...
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    JCB
    2002
    102views more  JCB 2002»
    A Lower Bound on the Reversal and Transposition Diameter
    14 years 4 days ago
    A Lower Bound on the Reversal and Transposition Diameter
    Download  www.dcc.unicamp.br
    One possible model to study genome evolution is to represent genomes as permutations of genes and compute distances based on the minimum number of certain operations (rearrangemen...
    João Meidanis, Maria Emilia Telles Walter, ...
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    JCB
    2002
    74views more  JCB 2002»
    Efficient Algorithms for Quantitative Trait Loci Mapping Problems
    14 years 4 days ago
    Efficient Algorithms for Quantitative Trait Loci Mapping Problems
    Download  user.it.uu.se
    Kajsa Ljungberg, Sverker Holmgren, Örjan Carl...
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    JCB
    2002
    70views more  JCB 2002»
    Strong Feature Sets from Small Samples
    14 years 4 days ago
    Strong Feature Sets from Small Samples
    Download  gsp.tamu.edu
    For small samples, classi er design algorithms typically suffer from over tting. Given a set of features, a classi er must be designed and its error estimated. For small samples, ...
    Seungchan Kim, Edward R. Dougherty, Junior Barrera...
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    JCB
    2002
    131views more  JCB 2002»
    Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
    14 years 4 days ago
    Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
    Download  www.math.leidenuniv.nl
    In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The reg...
    Hidde de Jong
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    JCB
    2002
    111views more  JCB 2002»
    A General Edit Distance between RNA Structures
    14 years 4 days ago
    A General Edit Distance between RNA Structures
    Download  www.techfak.uni-bielefeld.de
    Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
    Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
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    JCB
    2002
    106views more  JCB 2002»
    Detection of Recombination in DNA Multiple Alignments with Hidden Markov Models
    14 years 4 days ago
    Detection of Recombination in DNA Multiple Alignments with Hidden Markov Models
    Download  www.bioss.ac.uk
    Dirk Husmeier, Frank Wright
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    JCB
    2002
    87views more  JCB 2002»
    The Repetitive Sequence Database and Mining Putative Regulatory Elements in Gene Promoter Regions
    14 years 4 days ago
    The Repetitive Sequence Database and Mining Putative Regulatory Elements in Gene Promoter Regions
    Download  regrna.mbc.nctu.edu.tw
    At least 43% of the human genome is occupied by repetitive elements. Moreover, around 51% of the rice genome is occupied by repetitive elements. The analysis of repetitive element...
    Jorng-Tzong Horng, Hsien-Da Huang, Ming-Hui Jin, L...
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