BMCBI
2011
13 years 3 months ago
2011
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
CORR
2006
Springer
13 years 11 months ago
2006
Springer
An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A, C, G, U}. The higher structure i...
BIOINFORMATICS
2006
13 years 11 months ago
2006
A small class of RNA molecules, in particular the tiny genomes of viroids, are circular. Yet most structure prediction algorithms handle only linear RNAs. The most straightforward ...
BMCBI
2007
13 years 11 months ago
2007
Background: In recent years, RNA molecules that are not translated into proteins (ncRNAs) have drawn a great deal of attention, as they were shown to be involved in many cellular ...
BMCBI
2010
13 years 11 months ago
2010
Background: In recent years, the number of available RNA structures has rapidly grown reflecting the increased interest on RNA biology. Similarly to the studies carried out two de...
GCB
2008
Springer
14 years 15 days ago
2008
Springer
: Specific functions of RNA molecules are often associated with different motifs in the RNA structure. The key feature that forms such an RNA motif is the combination of sequence ...
ICALP
2003
Springer
14 years 4 months ago
2003
Springer
We describe several computational problems on prediction and design of RNA molecules.
IV
2006
IEEE
14 years 5 months ago
2006
IEEE
Ribonucleic Acid (RNA) is an important molecule which performs a wide range of functions in biological systems. We present a method for visualizing, exploring and editing RNA mole...
SOFSEM
2010
Springer
14 years 8 months ago
2010
Springer
An arc-annotated string is a string of characters, called bases, augmented with a set of pairs, called arcs, each connecting two bases. Given arc-annotated strings P and Q the arc-...
RECOMB
2005
Springer
14 years 11 months ago
2005
Springer
Abstract. Recent studies demonstrating the existence of special non-coding "antisense" RNAs used in post-transcriptional gene regulation have received considerable attent...