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» A Graph Pebbling Algorithm on Weighted Graphs
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DATE
2002
IEEE
74views Hardware» more  DATE 2002»
14 years 1 months ago
Maze Routing with Buffer Insertion under Transition Time Constraints
In this paper, we address the problem of simultaneous routing and buffer insertion. Recently in [12, 22], the authors considered simultaneous maze routing and buffer insertion und...
Li-Da Huang, Minghorng Lai, D. F. Wong, Youxin Gao
COMGEO
2006
ACM
13 years 9 months ago
Computing homotopic shortest paths efficiently
Geometric shortest paths are a major topic in computational geometry; see the survey paper by Mitchell [12]. A shortest path between two points in a simple polygon can be found in...
Alon Efrat, Stephen G. Kobourov, Anna Lubiw
RECOMB
2006
Springer
14 years 9 months ago
Probabilistic Paths for Protein Complex Inference
Understanding how individual proteins are organized into complexes and pathways is a significant current challenge. We introduce new algorithms to infer protein complexes by combin...
Hailiang Huang, Lan V. Zhang, Frederick P. Roth, J...
BMCBI
2007
227views more  BMCBI 2007»
13 years 9 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
SODA
1998
ACM
157views Algorithms» more  SODA 1998»
13 years 10 months ago
A Polynomial Time Approximation Scheme for Minimum Routing Cost Spanning Trees
Given an undirected graph with nonnegative costs on the edges, the routing cost of any of its spanning trees is the sum over all pairs of vertices of the cost of the path between t...
Bang Ye Wu, Giuseppe Lancia, Vineet Bafna, Kun-Mao...