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» A Structure for Modern Computer Narratives
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BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
TITB
1998
135views more  TITB 1998»
13 years 7 months ago
ViVa: the virtual vascular project
The aim of the ViVa project is to develop tools for the modern hemodynamicist and cardiovascular surgeon to study and interpret the constantly increasing amount of information bei...
Gassan Abdoulaev, Sandro Cadeddu, Giovanni Delussu...
PVLDB
2008
126views more  PVLDB 2008»
13 years 7 months ago
Parallelizing query optimization
Many commercial RDBMSs employ cost-based query optimization exploiting dynamic programming (DP) to efficiently generate the optimal query execution plan. However, optimization tim...
Wook-Shin Han, Wooseong Kwak, Jinsoo Lee, Guy M. L...
FPL
2010
Springer
124views Hardware» more  FPL 2010»
13 years 5 months ago
Finding System-Level Information and Analyzing Its Correlation to FPGA Placement
One of the more popular placement algorithms for Field Programmable Gate Arrays (FPGAs) is called Simulated Annealing (SA). This algorithm tries to create a good quality placement ...
Farnaz Gharibian, Lesley Shannon, Peter Jamieson
BIOINFORMATICS
2011
13 years 2 months ago
Inverse perturbation for optimal intervention in gene regulatory networks
Motivation: Analysis and intervention in the dynamics of gene regulatory networks is at the heart of emerging efforts in the development of modern treatment of numerous ailments i...
Nidhal Bouaynaya, Roman Shterenberg, Dan Schonfeld