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» A complex biological database querying method
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EDBT
2012
ACM
257views Database» more  EDBT 2012»
11 years 10 months ago
Indexing and mining topological patterns for drug discovery
Increased availability of large repositories of chemical compounds has created new challenges and opportunities for the application of data-mining and indexing techniques to probl...
Sayan Ranu, Ambuj K. Singh
NAR
2011
331views Computer Vision» more  NAR 2011»
13 years 2 months ago
Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource
The Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis (CAMERA, http://camera.calit2.net/) is a database and associated computational infrastructur...
Shulei Sun, Jing Chen, Weizhong Li, Ilkay Altintas...
PODS
2007
ACM
159views Database» more  PODS 2007»
14 years 7 months ago
Generalized hypertree decompositions: np-hardness and tractable variants
The generalized hypertree width GHW(H) of a hypergraph H is a measure of its cyclicity. Classes of conjunctive queries or constraint satisfaction problems whose associated hypergr...
Georg Gottlob, Thomas Schwentick, Zoltán Mi...
SSDBM
2005
IEEE
99views Database» more  SSDBM 2005»
14 years 1 months ago
Incorporating Semantics in Scientific Workflow Authoring
The tools used to analyze scientific data are often distinct from those used to archive, retrieve, and query data. A scientific workflow environment, however, allows one to seamles...
Chad Berkley, Shawn Bowers, Matthew B. Jones, Bert...
RECOMB
2004
Springer
14 years 8 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler