1147 search results - page 84 / 230 » Alignments of RNA Structures |
NAR
2010
13 years 2 months ago
2010
As larger macromolecular structures become available, there is a growing need to understand their `internal' volumes--such as deep clefts, channels and cavities--as these oft...
BMCBI
2006
13 years 8 months ago
2006
Background: Comparing related structures and viewing the structures in the context of sequence alignments are important tasks in protein structure-function research. While many pr...
RECOMB
2006
Springer
14 years 8 months ago
2006
Springer
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
ESWS
2008
Springer
13 years 9 months ago
2008
Springer
Evaluation of ontology alignments is in practice done in two ways: (1) assessing individual correspondences and (2) comparing the alignment to a reference alignment. However, this ...
BMCBI
2004
13 years 7 months ago
2004
Background: Profile-based analysis of multiple sequence alignments (MSA) allows for accurate comparison of protein families. Here, we address the problems of detecting statistical...