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» Application of Graph-based Data Mining to Metabolic Pathways
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BMCBI
2010
223views more  BMCBI 2010»
13 years 2 months ago
MetNetGE: interactive views of biological networks and ontologies
Background: Linking high-throughput experimental data with biological networks is a key step for understanding complex biological systems. Currently, visualization tools for large...
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin ...
RECOMB
2004
Springer
14 years 7 months ago
Discovering temporal relations in molecular pathways using protein-protein interactions
The availability of large-scale protein-protein interaction data provides us with many opportunities to study molecular pathways involving proteins. In this paper we propose to mi...
Martin Farach-Colton, Yang Huang, John L. L. Woolf...
PAKDD
2010
ACM
171views Data Mining» more  PAKDD 2010»
13 years 5 months ago
Summarizing Multidimensional Data Streams: A Hierarchy-Graph-Based Approach
With the rapid development of information technology, many applications have to deal with potentially infinite data streams. In such a dynamic context, storing the whole data stre...
Yoann Pitarch, Anne Laurent, Pascal Poncelet
BMCBI
2007
182views more  BMCBI 2007»
13 years 7 months ago
Hybrid elementary flux analysis/nonparametric modeling: application for bioprocess control
Background: The progress in the "-omic" sciences has allowed a deeper knowledge on many biological systems with industrial interest. This knowledge is still rarely used ...
Ana P. Teixeira, Carlos Alves, Paula M. Alves, Man...
BMCBI
2006
114views more  BMCBI 2006»
13 years 7 months ago
Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle
Background: AMP-activated protein kinase (AMPK) has emerged as a significant signaling intermediary that regulates metabolisms in response to energy demand and supply. An investig...
Qingfeng Chen, Yi-Ping Phoebe Chen