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NAR
2011
207views Computer Vision» more  NAR 2011»
12 years 11 months ago
PSORTdb - an expanded, auto-updated, user-friendly protein subcellular localization database for Bacteria and Archaea
The subcellular localization (SCL) of a microbial protein provides clues about its function, its suitability as a drug, vaccine or diagnostic target and aids experimental design. ...
Nancy Y. Yu, Matthew R. Laird, Cory Spencer, Fiona...
NAR
2011
238views Computer Vision» more  NAR 2011»
13 years 3 months ago
COMBREX: a project to accelerate the functional annotation of prokaryotic genomes
COMBREX (http://combrex.bu.edu) is a project to increase the speed of the functional annotation of new bacterial and archaeal genomes. It consists of a database of functional pred...
Richard J. Roberts, Yi-Chien Chang, Zhenjun Hu, Jo...
DIS
2006
Springer
14 years 7 days ago
Mining Sectorial Episodes from Event Sequences
In this paper, we introduce a sectorial episode of the form C r, where C is a set of events and r is an event. The sectorial episode C r means that every event of C is followed b...
Takashi Katoh, Kouichi Hirata, Masateru Harao
RECOMB
2006
Springer
14 years 9 months ago
Sorting by Weighted Reversals, Transpositions, and Inverted Transpositions
Abstract. During evolution, genomes are subject to genome rearrangements that alter the ordering and orientation of genes on the chromosomes. If a genome consists of a single chrom...
Martin Bader, Enno Ohlebusch
ISMB
1997
13 years 10 months ago
Functional Prediction of B. subtilis Genes from Their Regulatory Sequences
In bacterial cells, gene expression is regulated by multiple sigma factors, each of which has its promoter specificity, according to their conditions. Thus, if we can discriminate...
Tetsushi Yada, Yasushi Totoki, Takahiro Ishii, Ken...