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RECOMB
2006
Springer
14 years 8 months ago
Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam ...
SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
13 years 12 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...
BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
Finding genomic ontology terms in text using evidence content
Background: The development of text mining systems that annotate biological entities with their properties using scientific literature is an important recent research topic. These...
Francisco M. Couto, Mário J. Silva, Pedro C...
BMCBI
2011
13 years 2 months ago
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in i
Background: In the last decades, microarray technology has spread, leading to a dramatic increase of publicly available datasets. The first statistical tools developed were focuse...
Paolo G. V. Martini, Davide Risso, Gabriele Sales,...
BIOINFORMATICS
2004
90views more  BIOINFORMATICS 2004»
13 years 7 months ago
GDPC: connecting researchers with multiple integrated data sources
Summary: The goal of this project is to simplify access to genomic diversity and phenotype data, thereby encouraging reuse of this data. The Genomic Diversity and Phenotype Connec...
Terry M. Casstevens, Edward S. Buckler