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BMCBI
2006
122views more  BMCBI 2006»
13 years 9 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
CDVE
2007
Springer
124views Visualization» more  CDVE 2007»
14 years 3 months ago
"Integrare", a Collaborative Environment for Behavior-Oriented Design
In order to build complex, large-scale, dependable systems it is necessary to use a development environment with an integrated set of capabilities that supports editing and formal...
Lian Wen, Robert Colvin, Kai Lin, John Seagrott, N...
SODA
2008
ACM
126views Algorithms» more  SODA 2008»
13 years 10 months ago
On distributing symmetric streaming computations
A common approach for dealing with large data sets is to stream over the input in one pass, and perform computations using sublinear resources. For truly massive data sets, howeve...
Jon Feldman, S. Muthukrishnan, Anastasios Sidiropo...
BMCBI
2007
128views more  BMCBI 2007»
13 years 9 months ago
Model order selection for bio-molecular data clustering
Background: Cluster analysis has been widely applied for investigating structure in bio-molecular data. A drawback of most clustering algorithms is that they cannot automatically ...
Alberto Bertoni, Giorgio Valentini
ICCAD
2001
IEEE
111views Hardware» more  ICCAD 2001»
14 years 6 months ago
Congestion Aware Layout Driven Logic Synthesis
In this paper, we present novel algorithms that effectively combine physical layout and early logic synthesis to improve overall design quality. In addition, we employ partitionin...
Thomas Kutzschebauch, Leon Stok