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CPM
1993
Springer
154views Combinatorics» more  CPM 1993»
13 years 12 months ago
On Suboptimal Alignments of Biological Sequences
It is widely accepted that the optimal alignment between a pair of proteins or nucleic acid sequences that minimizes the edit distance may not necessarily re ect the correct biolog...
Dalit Naor, Douglas L. Brutlag
COCOA
2008
Springer
13 years 9 months ago
Simplicial Powers of Graphs
In a finite simple undirected graph, a vertex is simplicial if its neighborhood is a clique. We say that, for k 2, a graph G = (VG, EG) is the k-simplicial power of a graph H = (V...
Andreas Brandstädt, Van Bang Le
WADS
1993
Springer
163views Algorithms» more  WADS 1993»
13 years 11 months ago
Minimum Weight Euclidean Matching and Weighted Relative Neighborhood Graphs
The Minimum Weight Euclidean Matching (MWEM) problem is: given 2n point sites in the plane with Euclidean metric for interpoint distances, match the sites into n pairs so that the...
Andy Mirzaian
RECOMB
2007
Springer
14 years 8 months ago
An Efficient and Accurate Graph-Based Approach to Detect Population Substructure
Currently, large-scale projects are underway to perform whole genome disease association studies. Such studies involve the genotyping of hundreds of thousands of SNP markers. One o...
Srinath Sridhar, Satish Rao, Eran Halperin
BMCBI
2007
127views more  BMCBI 2007»
13 years 7 months ago
Characterization of protein-interaction networks in tumors
Background: Analyzing differential-gene-expression data in the context of protein-interaction networks (PINs) yields information on the functional cellular status. PINs can be for...
Alexander Platzer, Paul Perco, Arno Lukas, Bernd M...