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» Computational Evolutionary Embryogeny
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NAR
2010
148views more  NAR 2010»
13 years 3 months ago
SIMAP - a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
The prediction of protein function as well as the reconstruction of evolutionary genesis employing sequence comparison at large is still the most powerful tool in sequence analysi...
Thomas Rattei, Patrick Tischler, Stefan Götz,...
VIS
2009
IEEE
399views Visualization» more  VIS 2009»
14 years 9 months ago
Visual Human+Machine Learning
In this paper we describe a novel method to integrate interactive visual analysis and machine learning to support the insight generation of the user. The suggested approach combine...
Raphael Fuchs, Jürgen Waser, Meister Eduard GrÃ...
RECOMB
2006
Springer
14 years 8 months ago
Efficient Enumeration of Phylogenetically Informative Substrings
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
RECOMB
2005
Springer
14 years 8 months ago
Constructing a Smallest Refining Galled Phylogenetic Network
Reticulation events occur frequently in many types of species. Therefore, to develop accurate methods for reconstructing phylogenetic networks in order to describe evolutionary his...
Trinh N. D. Huynh, Jesper Jansson, Nguyen Bao Nguy...
RECOMB
2005
Springer
14 years 8 months ago
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations
Background: Most cellular processes are carried out by multi-protein complexes, groups of proteins that bind together to perform a specific task. Some proteins form stable complex...
Elena Zotenko, Katia S. Guimarães, Raja Jot...