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NAR
2011
172views Computer Vision» more  NAR 2011»
13 years 14 days ago
NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data
Next-generation sequencing (NGS) together with bisulphite conversion allows the generation of whole genome methylation maps at single-cytosine resolution. This allows studying the...
Michael Hackenberg, Guillermo Barturen, José...
NAR
2011
186views Computer Vision» more  NAR 2011»
13 years 14 days ago
TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins
The initiation and regulation of transcription in eukaryotes is complex and involves a large number of transcription factors (TFs), which are known to bind to the regulatory regio...
Ulf Schaefer, Sebastian Schmeier, Vladimir B. Baji...
ISBI
2004
IEEE
14 years 10 months ago
Fast Multiresolution Photon-Limited Image Reconstruction
The techniques described in this paper allow multiscale photon-limited image reconstruction methods to be implemented with significantly less computational complexity than previou...
Rebecca Willett, Robert Nowak
RECOMB
2008
Springer
14 years 10 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
ICCAD
2003
IEEE
117views Hardware» more  ICCAD 2003»
14 years 6 months ago
On Whitespace and Stability in Mixed-Size Placement and Physical Synthesis
In the context of physical synthesis, large-scale standard-cell placement algorithms must facilitate incremental changes to layout, both local and global. In particular, flexible...
Saurabh N. Adya, Igor L. Markov, Paul Villarrubia