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» Declarative Querying for Biological Sequences
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CC
2007
Springer
14 years 1 months ago
A Declarative Framework for Analysis and Optimization
DeepWeaver-1 is a tool supporting cross-cutting program analysis and transformation components, called “weaves”. Like an aspect, a DeepWeaver weave consists of a query part, an...
Henry Falconer, Paul H. J. Kelly, David M. Ingram,...
VISUALIZATION
1996
IEEE
13 years 11 months ago
Flexible Information Visualization of Multivariate Data from Biological Sequence Similarity Searches
Information visualization faces challenges presented by the need to represent abstract data and the relationships within the data. Previously, we presented a system for visualizin...
Ed Huai-hsin Chi, John Riedl, Elizabeth Shoop, Joh...
BMCBI
2002
129views more  BMCBI 2002»
13 years 6 months ago
SeqHound: biological sequence and structure database as a platform for bioinformatics research
Background: SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platfor...
Katerina Michalickova, Gary D. Bader, Michel Dumon...
BMCBI
2010
219views more  BMCBI 2010»
13 years 1 months ago
BiologicalNetworks 2.0 - an integrative view of genome biology data
Background: A significant problem in the study of mechanisms of an organism's development is the elucidation of interrelated factors which are making an impact on the differe...
Sergey Kozhenkov, Yulia Dubinina, Mayya Sedova, Am...
CSWWS
2006
13 years 10 months ago
A Distributed Agent System upon Semantic Web Technologies to Provide Biological Data
Bioinformaticians are accustomed to going through analysis steps, in which they employ several data sources, like protein sequence and protein interaction databases, to carry out t...
Farzad Kohantorabi, Gregory Butler, Christopher J....