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APBC
2004
108views Bioinformatics» more  APBC 2004»
13 years 8 months ago
Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
FTTCS
2006
132views more  FTTCS 2006»
13 years 7 months ago
Algorithms and Data Structures for External Memory
Data sets in large applications are often too massive to fit completely inside the computer's internal memory. The resulting input/output communication (or I/O) between fast ...
Jeffrey Scott Vitter
GECCO
2006
Springer
124views Optimization» more  GECCO 2006»
13 years 11 months ago
Rotated test problems for assessing the performance of multi-objective optimization algorithms
This paper presents four rotatable multi-objective test problems that are designed for testing EMO (Evolutionary Multiobjective Optimization) algorithms on their ability in dealin...
Antony W. Iorio, Xiaodong Li
IPPS
2010
IEEE
13 years 5 months ago
Oblivious algorithms for multicores and network of processors
We address the design of algorithms for multicores that are oblivious to machine parameters. We propose HM, a multicore model consisting of a parallel shared-memory machine with hi...
Rezaul Alam Chowdhury, Francesco Silvestri, Brando...
DAC
2006
ACM
14 years 8 months ago
Generation of yield-aware Pareto surfaces for hierarchical circuit design space exploration
Pareto surfaces in the performance space determine the range of feasible performance values for a circuit topology in a given technology. We present a non-dominated sorting based ...
Saurabh K. Tiwary, Pragati K. Tiwary, Rob A. Ruten...