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BMCBI
2007
158views more  BMCBI 2007»
13 years 7 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
CDC
2009
IEEE
149views Control Systems» more  CDC 2009»
13 years 8 months ago
Context-dependent multi-class classification with unknown observation and class distributions with applications to bioinformatic
We consider the multi-class classification problem, based on vector observation sequences, where the conditional (given class observations) probability distributions for each class...
Alex S. Baras, John S. Baras
BMCBI
2008
153views more  BMCBI 2008»
13 years 7 months ago
AWclust: point-and-click software for non-parametric population structure analysis
Background: Population structure analysis is important to genetic association studies and evolutionary investigations. Parametric approaches, e.g. STRUCTURE and L-POP, usually ass...
Xiaoyi Gao, Joshua D. Starmer
BMCBI
2007
144views more  BMCBI 2007»
13 years 7 months ago
Accelerated search for biomolecular network models to interpret high-throughput experimental data
Background: The functions of human cells are carried out by biomolecular networks, which include proteins, genes, and regulatory sites within DNA that encode and control protein e...
Suman Datta, Bahrad A. Sokhansanj
ICONIP
2007
13 years 9 months ago
Using Generalization Error Bounds to Train the Set Covering Machine
In this paper we eliminate the need for parameter estimation associated with the set covering machine (SCM) by directly minimizing generalization error bounds. Firstly, we consider...
Zakria Hussain, John Shawe-Taylor