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» Evaluating use of data flow systems for large graph analysis
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BMCBI
2007
93views more  BMCBI 2007»
13 years 7 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...
DATE
2005
IEEE
171views Hardware» more  DATE 2005»
14 years 1 months ago
Access Pattern-Based Code Compression for Memory-Constrained Embedded Systems
As compared to a large spectrum of performance optimizations, relatively little effort has been dedicated to optimize other aspects of embedded applications such as memory space r...
Ozcan Ozturk, Hendra Saputra, Mahmut T. Kandemir, ...
PPOPP
2012
ACM
12 years 3 months ago
Massively parallel breadth first search using a tree-structured memory model
Analysis of massive graphs has emerged as an important area for massively parallel computation. In this paper, it is shown how the Fresh Breeze trees-of-chunks memory model may be...
Tom St. John, Jack B. Dennis, Guang R. Gao
PPOPP
2006
ACM
14 years 1 months ago
On-line automated performance diagnosis on thousands of processes
Performance analysis tools are critical for the effective use of large parallel computing resources, but existing tools have failed to address three problems that limit their scal...
Philip C. Roth, Barton P. Miller
ICDE
2009
IEEE
133views Database» more  ICDE 2009»
14 years 2 months ago
STAR: Steiner-Tree Approximation in Relationship Graphs
— Large graphs and networks are abundant in modern information systems: entity-relationship graphs over relational data or Web-extracted entities, biological networks, social onl...
Gjergji Kasneci, Maya Ramanath, Mauro Sozio, Fabia...