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BMCBI
2007
129views more  BMCBI 2007»
13 years 10 months ago
Integrated network reconstruction, visualization and analysis using YANAsquare
Background: Modeling of metabolic networks includes tasks such as network assembly, network overview, calculation of metabolic fluxes and testing the robustness of the network. Re...
Roland Schwarz, Chunguang Liang, Christoph Kaleta,...
BMCBI
2006
190views more  BMCBI 2006»
13 years 10 months ago
VANTED: A system for advanced data analysis and visualization in the context of biological networks
Background: Recent advances with high-throughput methods in life-science research have increased the need for automatized data analysis and visual exploration techniques. Sophisti...
Björn H. Junker, Christian Klukas, Falk Schre...
BMCBI
2005
302views more  BMCBI 2005»
13 years 10 months ago
CGHPRO - A comprehensive data analysis tool for array CGH
Background: Array CGH (Comparative Genomic Hybridisation) is a molecular cytogenetic technique for the genome wide detection of chromosomal imbalances. It is based on the cohybrid...
Wei Chen, Fikret Erdogan, H.-Hilger Ropers, Steffe...
HVC
2005
Springer
183views Hardware» more  HVC 2005»
14 years 3 months ago
Detecting Potential Deadlocks with Static Analysis and Run-Time Monitoring
Concurrent programs are notorious for containing errors that are difficult to reproduce and diagnose. A common kind of concurrency error is deadlock, which occurs when a set of thr...
Rahul Agarwal, Liqiang Wang, Scott D. Stoller
ASPLOS
2004
ACM
14 years 3 months ago
Software prefetching for mark-sweep garbage collection: hardware analysis and software redesign
Tracing garbage collectors traverse references from live program variables, transitively tracing out the closure of live objects. Memory accesses incurred during tracing are essen...
Chen-Yong Cher, Antony L. Hosking, T. N. Vijaykuma...