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BMCBI
2010
114views more  BMCBI 2010»
13 years 9 months ago
Detection of gene orthology from gene co-expression and protein interaction networks
Background: Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our und...
Fadi Towfic, Susan VanderPlas, Casey A. Oliver, Ol...
CCE
2008
13 years 9 months ago
Identification of regulatory mechanisms of the hepatic response to thermal injury
The purpose of this paper is to evaluate the hypothesis that a systems biology approach can be developed such that a set of transcription factors, relevant to burn-induced inflamm...
Eric Yang, Timothy Maguire, Martin L. Yarmush, Fra...
VIS
2006
IEEE
128views Visualization» more  VIS 2006»
14 years 10 months ago
Hierarchy-based 3-D Visualization of Homologous Gene Expression across Different Organisms
With the explosive growth of proteomic and expression data of homologous genes, it becomes necessary to explore new methods to visualize and analyze related gene expression data t...
Li Jin, Karl V. Steiner, Carl J. Schmidt, Keith...
BMCBI
2011
13 years 3 months ago
Errors in CGAP xProfiler and cDNA DGED: the importance of library parsing and gene selection algorithms
Background: The Cancer Genome Anatomy Project (CGAP) xProfiler and cDNA Digital Gene Expression Displayer (DGED) have been made available to the scientific community over a decade...
Andrew T. Milnthorpe, Mikhail Soloviev
IEAAIE
2010
Springer
13 years 6 months ago
Constructive Neural Networks to Predict Breast Cancer Outcome by Using Gene Expression Profiles
Abstract. Gene expression profiling strategies have attracted considerable interest from biologist due to the potential for high throughput analysis of hundreds of thousands of gen...
Daniel Urda, José Luis Subirats, Leonardo F...