175 search results - page 9 / 35 » Fast Structured Motif Search in DNA Sequences |
RECOMB
2004
Springer
14 years 8 months ago
2004
Springer
In this paper we describe an algorithm for the localization of structured models, i.e. sequences of (simple) motifs and distance constraints. It basically combines standard patter...
BMCBI
2002
13 years 7 months ago
2002
Background: Pattern matching is the core of bioinformatics; it is used in database searching, restriction enzyme mapping, and finding open reading frames. It is done repeatedly ov...
BMCBI
2007
13 years 7 months ago
2007
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
CSB
2005
IEEE
13 years 9 months ago
2005
IEEE
Genome sequencing opened a new era in genetics allowing the study of genomes at the nucleotide level. However, the chosen method of sequencing produced large numbers of nucleotide...
RECOMB
2003
Springer
14 years 8 months ago
2003
Springer
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...