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BMCBI
2007
164views more  BMCBI 2007»
13 years 10 months ago
SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA
Background: Computational methods to predict transcription factor binding sites (TFBS) based on exhaustive algorithms are guaranteed to find the best patterns but are often limite...
Fathi Elloumi, Martha Nason
BMCBI
2005
109views more  BMCBI 2005»
13 years 10 months ago
Genome comparison without alignment using shortest unique substrings
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
Bernhard Haubold, Nora Pierstorff, Friedrich M&oum...
BMCBI
2004
111views more  BMCBI 2004»
13 years 9 months ago
Multiclass discovery in array data
Background: A routine goal in the analysis of microarray data is to identify genes with expression levels that correlate with known classes of experiments. In a growing number of ...
Yingchun Liu, Markus Ringnér
JASIS
2010
262views more  JASIS 2010»
13 years 8 months ago
New event detection and topic tracking in Turkish
Topic detection and tracking (TDT) applications aim to organize the temporally ordered stories of a news stream according to the events. Two major problems in TDT are new event de...
Fazli Can, Seyit Kocberber, Ozgur Baglioglu, Suley...
BMCBI
2011
13 years 4 months ago
Statistical learning techniques applied to epidemiology: a simulated case-control comparison study with logistic regression
Background: When investigating covariate interactions and group associations with standard regression analyses, the relationship between the response variable and exposure may be ...
John J. Heine, Walker H. Land Jr., Kathleen M. Ega...