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» GPX: Interactive Mining of Gene Expression Data
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BMCBI
2007
197views more  BMCBI 2007»
13 years 7 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park
RECOMB
2006
Springer
14 years 7 months ago
Identification and Evaluation of Functional Modules in Gene Co-expression Networks
Abstract. Identifying gene functional modules is an important step towards elucidating gene functions at a global scale. In this paper, we introduce a simple method to construct ge...
Jianhua Ruan, Weixiong Zhang
IV
2008
IEEE
109views Visualization» more  IV 2008»
14 years 1 months ago
Visualization of Gene Combinations
Advances in the field of microarray technology have attracted a lot of attention in the last years. More and more biological experiments are conducted based on microarrays. The c...
Christian Tominski, Heidrun Schumann
BMCBI
2010
112views more  BMCBI 2010»
13 years 7 months ago
The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datas
Background: Standardization of analytical approaches and reporting methods via community-wide collaboration can work synergistically with web-tool development to result in rapid c...
Adam J. Carroll, Murray R. Badger, A. Harvey Milla...
CIT
2004
Springer
13 years 11 months ago
BioPubMiner: Machine Learning Component-Based Biomedical Information Analysis Platform
Abstract. In this paper we introduce BioPubMiner, a machine learning component-based platform for biomedical information analysis. BioPubMiner employs natural language processing t...
Jae-Hong Eom, Byoung-Tak Zhang