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IPPS
2010
IEEE
13 years 7 months ago
Exploring parallelism in short sequence mapping using Burrows-Wheeler Transform
Next-generation high throughput sequencing instruments are capable of generating hundreds of millions of reads in a single run. Mapping those reads to a reference genome is an ext...
Doruk Bozdag, Ayat Hatem, Ümit V. Çata...
IHI
2012
370views Healthcare» more  IHI 2012»
12 years 4 months ago
FUSE: a system for data-driven multi-level functional summarization of protein interaction networks
Despite recent progress in high-throughput experimental studies, systems level visualization and analysis of large protein interaction networks (ppi) remains a challenging task, g...
Boon-Siew Seah, Sourav S. Bhowmick, Charles Forbes...
GIS
2009
ACM
14 years 10 months ago
Map Matching and Uncertainty: an Algorithm and Real-World Experiments
A common problem in moving object databases (MOD) is the reconstruction of a trajectory from a trajectory sample (i.e., a finite sequence of time-space points). A typical solution...
Alejandro A. Vaisman, Bart Kuijpers, Bart Moelans,...
DAC
2007
ACM
14 years 10 months ago
GlitchMap: An FPGA Technology Mapper for Low Power Considering Glitches
In 90-nm technology, dynamic power is still the largest power source in FPGAs [1], and signal glitches contribute a large portion of the dynamic power consumption. Previous powera...
Lei Cheng, Deming Chen, Martin D. F. Wong
DAC
1998
ACM
14 years 10 months ago
Exact Tree-based FPGA Technology Mapping for Logic Blocks with Independent LUTs
The logic blocks CLBs of a lookup table LUT based FPGA consist of one or more LUTs, possibly of di erent sizes. In this paper, we focus on technology mapping for CLBs with several...
Madhukar R. Korupolu, K. K. Lee, D. F. Wong