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CIBCB
2006
IEEE
14 years 2 months ago
Machine Learning in Basecalling Decoding Trace Peak Behaviour
— DNA sequence basecalling is commonly regarded as a solved problem, despite significant error rates being reflected in inaccuracies in databases and genome annotations. These er...
David Thornley, Stavros Petridis
ICPR
2004
IEEE
14 years 9 months ago
Filtering with Gray-Code Kernels
In this paper we introduce a family of filter kernels the Gray-Code Kernels (GCK) and demonstrate their use in image analysis. Filtering an image with a sequence of Gray-Code Kern...
Gil Ben-Artzi, Hagit Hel-Or, Yacov Hel-Or
RECOMB
2000
Springer
14 years 22 hour ago
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm
In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
Franco P. Preparata, Eli Upfal
BMCBI
2008
195views more  BMCBI 2008»
13 years 8 months ago
Goldsurfer2 (Gs2): A comprehensive tool for the analysis and visualization of genome wide association studies
Background: Genome wide association (GWA) studies are now being widely undertaken aiming to find the link between genetic variations and common diseases. Ideally, a well-powered G...
Fredrik Pettersson, Andrew P. Morris, Michael R. B...
BMCBI
2007
134views more  BMCBI 2007»
13 years 8 months ago
PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results
Background: BLAST searches are widely used for sequence alignment. The search results are commonly adopted for various functional and comparative genomics tasks such as annotating...
Ji He, Xinbin Dai, Xuechun Zhao