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    FCCM
    2006
    IEEE
    119views VLSI» more  FCCM 2006»
    Integrating FPGA Acceleration into the Protomol Molecular Dynamics Code: Preliminary Report
    14 years 3 months ago
    Integrating FPGA Acceleration into the Protomol Molecular Dynamics Code: Preliminary Report
    Download  www.bu.edu
    : We describe a new pipeline for computing non-bonded forces and its integration into the ProtoMol molecular dynamics (MD) code. There are several innovations: a novel interpolatio...
    Yongfeng Gu, Tom Van Court, Martin C. Herbordt
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    IPPS
    2009
    IEEE
    154views Distributed And Parallel Com...» more  IPPS 2009»
    Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
    14 years 3 months ago
    Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
    Download  www.hicomb.org
    Emerging DNA sequencing technologies open up exciting new opportunities for genome sequencing by generating read data with a massive throughput. However, produced reads are signif...
    Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang...
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    VMV
    2000
    175views Visualization» more  VMV 2000»
    Accelerating Morphological Analysis with Graphics Hardware
    13 years 10 months ago
    Accelerating Morphological Analysis with Graphics Hardware
    Download  www.vis.uni-stuttgart.de
    Direct volume rendering is a common means of visualizing three-dimensional data nowadays. It is, however, still a very time consuming process to create informative and visual appe...
    Matthias Hopf, Thomas Ertl
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    NIPS
    2008
    210views Information Technology» more  NIPS 2008»
    Accelerating Bayesian Inference over Nonlinear Differential Equations with Gaussian Processes
    13 years 10 months ago
    Accelerating Bayesian Inference over Nonlinear Differential Equations with Gaussian Processes
    Download  www.dcs.gla.ac.uk
    Identification and comparison of nonlinear dynamical system models using noisy and sparse experimental data is a vital task in many fields, however current methods are computation...
    Ben Calderhead, Mark Girolami, Neil D. Lawrence
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    IJCBDD
    2008
    113views more  IJCBDD 2008»
    Parsimony accelerated Maximum Likelihood searches
    13 years 9 months ago
    Parsimony accelerated Maximum Likelihood searches
    Download  www.ncbi.nlm.nih.gov
    : Phylogenetic search is a key tool used in a variety of biological research endeavors. However, this search problem is known to be computationally difficult, due to the astronomic...
    Kenneth Sundberg, Timothy O'Connor, Hyrum Carroll,...
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