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BMCBI
2007
146views more  BMCBI 2007»
13 years 7 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2008
171views more  BMCBI 2008»
13 years 7 months ago
A general approach to simultaneous model fitting and variable elimination in response models for biological data with many more
Background: With the advent of high throughput biotechnology data acquisition platforms such as micro arrays, SNP chips and mass spectrometers, data sets with many more variables ...
Harri T. Kiiveri
BMCBI
2006
249views more  BMCBI 2006»
13 years 7 months ago
Gene functional similarity search tool (GFSST)
Background: With the completion of the genome sequences of human, mouse, and other species and the advent of high throughput functional genomic research technologies such as biomi...
Peisen Zhang, Jinghui Zhang, Huitao Sheng, James J...
ISCA
2006
IEEE
130views Hardware» more  ISCA 2006»
13 years 7 months ago
Area-Performance Trade-offs in Tiled Dataflow Architectures
: Tiled architectures, such as RAW, SmartMemories, TRIPS, and WaveScalar, promise to address several issues facing conventional processors, including complexity, wire-delay, and pe...
Steven Swanson, Andrew Putnam, Martha Mercaldi, Ke...
MICRO
2008
IEEE
146views Hardware» more  MICRO 2008»
13 years 7 months ago
A small cache of large ranges: Hardware methods for efficiently searching, storing, and updating big dataflow tags
Dynamically tracking the flow of data within a microprocessor creates many new opportunities to detect and track malicious or erroneous behavior, but these schemes all rely on the...
Mohit Tiwari, Banit Agrawal, Shashidhar Mysore, Jo...