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» Interactive visualization of protein dynamics
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BMCBI
2008
118views more  BMCBI 2008»
13 years 9 months ago
Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical
Background: In accordance with the increasing amount of information concerning individual differences in drug response and molecular interaction, the role of in silico prediction ...
Takeshi Arikuma, Sumi Yoshikawa, Ryuzo Azuma, Kent...
ECCB
2002
IEEE
14 years 1 months ago
Stochastic roadmap simulation for the study of ligand-protein interactions
The dynamics of ligand-protein interactions are necessary to understand for the design of novel therapeutic agents. In this paper, we establish the use of Stochastic Roadmap Simul...
Mehmet Serkan Apaydin, Carlos Guestrin, Chris Varm...
BMCBI
2007
117views more  BMCBI 2007»
13 years 9 months ago
Influence of degree correlations on network structure and stability in protein-protein interaction networks
Background: The existence of negative correlations between degrees of interacting proteins is being discussed since such negative degree correlations were found for the large-scal...
Caroline C. Friedel, Ralf Zimmer
BMCBI
2007
130views more  BMCBI 2007»
13 years 9 months ago
A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
IV
2006
IEEE
97views Visualization» more  IV 2006»
14 years 3 months ago
Towards Ubiquitous Brushing for Information Visualization
Brushing is a collection of techniques to dynamically query and directly select elements on the visual display. Such interaction allows the user to explore the visualization, to i...
Jonathan C. Roberts, Michael A. E. Wright