Exploiting compile time knowledge to improve memory bandwidth can produce noticeable improvements at run-time [13, 1]. Allocating the data structure [13] to separate memories when...
Interactive program steering permits researchers to monitor and guide their applications during runtime. Interactive steering can help make end users more effective in addressing ...
Background: CRANKITE is a suite of programs for simulating backbone conformations of polypeptides and proteins. The core of the suite is an efficient Metropolis Monte Carlo sample...
Quantum chemistry applications such as the General Atomic and Molecular Electronic Structure System (GAMESS) that can execute on a complex peta-scale parallel computing environment...
This paper first analyzes the feedback principle of nature immune system and then the immune process is imitated by virtue of nonlinear molecular dynamics. Then the mathematic mode...