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DASFAA
2009
IEEE
173views Database» more  DASFAA 2009»
13 years 11 months ago
A Uniform Framework for Ad-Hoc Indexes to Answer Reachability Queries on Large Graphs
Graph-structured databases and related problems such as reachability query processing have been increasingly relevant to many applications such as XML databases, biological databas...
Linhong Zhu, Byron Choi, Bingsheng He, Jeffrey Xu ...
IRI
2007
IEEE
14 years 1 months ago
A Reference Framework for Requirements and Architecture in Biomedical Grid Systems
In this paper we introduce the work done to define a framework for requirements and architectural understanding in biomedical grid computing systems. A set of core requirements fo...
Chris Mattmann, Vito Perrone, Sean C. Kelly, Danie...
SIROCCO
2008
13 years 9 months ago
Recovering the Long-Range Links in Augmented Graphs
The augmented graph model, as introduced by Kleinberg (STOC 2000), is an appealing model for analyzing navigability in social networks. Informally, this model is defined by a pair...
Pierre Fraigniaud, Emmanuelle Lebhar, Zvi Lotker
BMCBI
2007
181views more  BMCBI 2007»
13 years 7 months ago
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases
Background: In recent years, mammalian protein-protein interaction network databases have been developed. The interactions in these databases are either extracted manually from lo...
Seth I. Berger, Jeremy M. Posner, Avi Ma'ayan
BMCBI
2006
104views more  BMCBI 2006»
13 years 7 months ago
MANET: tracing evolution of protein architecture in metabolic networks
Background: Cellular metabolism can be characterized by networks of enzymatic reactions and transport processes capable of supporting cellular life. Our aim is to find evolutionar...
Hee Shin Kim, Jay E. Mittenthal, Gustavo Caetano-A...