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BMCBI
2006
112views more  BMCBI 2006»
13 years 8 months ago
A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database
Background: We present here the PhIGs database, a phylogenomic resource for sequenced genomes. Although many methods exist for clustering gene families, very few attempt to create...
Paramvir S. Dehal, Jeffrey L. Boore
BMCBI
2007
148views more  BMCBI 2007»
13 years 8 months ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...
TCAD
2008
136views more  TCAD 2008»
13 years 8 months ago
A Geometric Programming-Based Worst Case Gate Sizing Method Incorporating Spatial Correlation
We present an efficient optimization scheme for gate sizing in the presence of process variations. Our method is a worst-case design scheme, but it reduces the pessimism involved i...
Jaskirat Singh, Zhi-Quan Luo, Sachin S. Sapatnekar
INFSOF
2007
145views more  INFSOF 2007»
13 years 8 months ago
Metrics for data warehouse conceptual models understandability
Due to the principal role of Data warehouses (DW) in making strategy decisions, data warehouse quality is crucial for organizations. Therefore, we should use methods, models, tech...
Manuel A. Serrano, Juan Trujillo, Coral Calero, Ma...
BMCBI
2005
77views more  BMCBI 2005»
13 years 8 months ago
Ontological visualization of protein-protein interactions
Background: Cellular processes require the interaction of many proteins across several cellular compartments. Determining the collective network of such interactions is an importa...
Harold J. Drabkin, Christopher Hollenbeck, David P...