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VLSID
2002
IEEE
106views VLSI» more  VLSID 2002»
14 years 8 months ago
SWASAD: An ASIC Design for High Speed DNA Sequence Matching
This paper presents the Smith and Waterman Algorithm-Specific ASIC Design (SWASAD) project. This is a hardware solution that implements the S&W algorithm.. The SWASAD is an imp...
Tony Han, Sri Parameswaran
ECCV
2006
Springer
13 years 11 months ago
Motion Segmentation Using an Occlusion Detector
We present a novel method for the detection of motion boundaries in a video sequence based on differential properties of the spatio-temporal domain. Regarding the video sequence as...
Doron Feldman, Daphna Weinshall
NAR
2008
122views more  NAR 2008»
13 years 7 months ago
SIMAP - structuring the network of protein similarities
Protein sequences are the most important source of evolutionary and functional information for new proteins. In order to facilitate the computationally intensive tasks of sequence...
Thomas Rattei, Patrick Tischler, Roland Arnold, Fr...
BMCBI
2005
94views more  BMCBI 2005»
13 years 7 months ago
Computational identification of strain-, species- and genus-specific proteins
Background: The identification of unique proteins at different taxonomic levels has both scientific and practical value. Strain-, species- and genus-specific proteins can provide ...
Raja Mazumder, Darren A. Natale, Sudhir Murthy, Ra...
RECOMB
2006
Springer
14 years 7 months ago
CONTRAlign: Discriminative Training for Protein Sequence Alignment
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
Chuong B. Do, Samuel S. Gross, Serafim Batzoglou