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BMCBI
2004
151views more  BMCBI 2004»
13 years 7 months ago
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics
Background: The general problem of RNA secondary structure prediction under the widely used thermodynamic model is known to be NP-complete when the structures considered include a...
Jens Reeder, Robert Giegerich
ICCAD
2009
IEEE
147views Hardware» more  ICCAD 2009»
13 years 5 months ago
SAT-based protein design
Computational protein design can be formulated as an optimization problem, where the objective is to identify the sequence of amino acids that minimizes the energy of a given prot...
Noah Ollikainen, Ellen Sentovich, Carlos Coelho, A...

Publication
207views
14 years 5 months ago
Incorporating Higher-Order Cues in Image Colorization
We consider the colorization problem of grayscale images when some pixels, called scribbles, with initial colors are given. In this paper, we propose a new multi-layer graph model ...
Tae Hoon Kim (Seoul National University), Kyoung M...
RSS
2007
176views Robotics» more  RSS 2007»
13 years 8 months ago
Active Policy Learning for Robot Planning and Exploration under Uncertainty
Abstract— This paper proposes a simulation-based active policy learning algorithm for finite-horizon, partially-observed sequential decision processes. The algorithm is tested i...
Ruben Martinez-Cantin, Nando de Freitas, Arnaud Do...
JMLR
2008
230views more  JMLR 2008»
13 years 7 months ago
Exponentiated Gradient Algorithms for Conditional Random Fields and Max-Margin Markov Networks
Log-linear and maximum-margin models are two commonly-used methods in supervised machine learning, and are frequently used in structured prediction problems. Efficient learning of...
Michael Collins, Amir Globerson, Terry Koo, Xavier...