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ICML
2005
IEEE
14 years 9 months ago
Fast condensed nearest neighbor rule
We present a novel algorithm for computing a training set consistent subset for the nearest neighbor decision rule. The algorithm, called FCNN rule, has some desirable properties....
Fabrizio Angiulli
BMCBI
2007
197views more  BMCBI 2007»
13 years 8 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park
RECOMB
2006
Springer
14 years 8 months ago
Maximal Accurate Forests from Distance Matrices
Abstract. We present a fast converging method for distance-based phylogenetic inference, which is novel in two respects. First, it is the only method (to our knowledge) to guarante...
Constantinos Daskalakis, Cameron Hill, Alexander J...
HPCA
1999
IEEE
14 years 15 days ago
Improving the Accuracy vs. Speed Tradeoff for Simulating Shared-Memory Multiprocessors with ILP Processors
Previous simulators for shared-memory architectures have imposed a large tradeoff between simulation accuracy and speed. Most such simulators model simple processors that do not e...
Murthy Durbhakula, Vijay S. Pai, Sarita V. Adve
BMCBI
2004
140views more  BMCBI 2004»
13 years 8 months ago
What can we learn from noncoding regions of similarity between genomes?
Background: In addition to known protein-coding genes, large amounts of apparently non-coding sequence are conserved between the human and mouse genomes. It seems reasonable to as...
Thomas A. Down, Tim J. P. Hubbard