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» Modelling Developmental Regulatory Networks
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FORMATS
2007
Springer
14 years 2 months ago
On Timed Models of Gene Networks
Abstract. We present a systematic translation from timed models of genetic regulatory networks into products of timed automata to which one can apply verification tools in order l...
Grégory Batt, Ramzi Ben Salah, Oded Maler
BMCBI
2006
126views more  BMCBI 2006»
13 years 8 months ago
A joint model of regulatory and metabolic networks
Background: Gene regulation and metabolic reactions are two primary activities of life. Although many works have been dedicated to study each system, the coupling between them is ...
Chen-Hsiang Yeang, Martin Vingron
BMCBI
2007
169views more  BMCBI 2007»
13 years 8 months ago
Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
HISB
2011
99views more  HISB 2011»
12 years 7 months ago
Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism
—We address the problem of finding a mathematical model for the genetic network regulating the stress response of the yeast Saccharomyces cerevisiae to the fungicide mancozeb. A...
Dulce Calçada, Susana Vinga, Ana T. Freitas...
RECOMB
2004
Springer
14 years 8 months ago
Learning Regulatory Network Models that Represent Regulator States and Roles
Abstract. We present an approach to inferring probabilistic models of generegulatory networks that is intended to provide a more mechanistic representation of transcriptional regul...
Keith Noto, Mark Craven