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» On Timed Models of Gene Networks
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JBCB
2007
161views more  JBCB 2007»
13 years 7 months ago
On Cooperative Quasi-Equilibrium Models of transcriptional Regulation
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...
Eric Mjolsness
BMCBI
2007
148views more  BMCBI 2007»
13 years 8 months ago
Evaluation of gene-expression clustering via mutual information distance measure
Background: The definition of a distance measure plays a key role in the evaluation of different clustering solutions of gene expression profiles. In this empirical study we compa...
Ido Priness, Oded Maimon, Irad E. Ben-Gal
FBIT
2007
IEEE
14 years 2 months ago
Unsupervised Learning in Spectral Genome Analysis
The tree representation as a model for organismal evolution has been in use since before Darwin. However, with the recent unprecedented access to biomolecular data it has been dis...
Lutz Hamel, Neha Nahar, Maria S. Poptsova, Olga Zh...
ER
2003
Springer
99views Database» more  ER 2003»
14 years 1 months ago
A General Model for Online Analytical Processing of Complex Data
Abstract. It has been well recognized that online analytical processing (OLAP) can provide important insights into huge archives of data. While the conventional OLAP model is capab...
Jian Pei
RECOMB
2009
Springer
14 years 8 months ago
Evaluating Between-Pathway Models with Expression Data
Abstract. Between-Pathway Models (BPMs) are network motifs consisting of pairs of putative redundant pathways. In this paper, we show how adding another source of high-throughput d...
Benjamin J. Hescott, Mark D. M. Leiserson, Lenore ...