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BMCBI
2010
183views more  BMCBI 2010»
13 years 9 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...
BMCBI
2007
265views more  BMCBI 2007»
13 years 9 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
CN
2008
98views more  CN 2008»
13 years 9 months ago
Description and simulation of dynamic mobility networks
During the last decade, the study of large scale complex networks has attracted a substantial amount of attention and works from several domains: sociology, biology, computer scie...
Antoine Scherrer, Pierre Borgnat, Eric Fleury, Jea...
SIGMETRICS
2008
ACM
181views Hardware» more  SIGMETRICS 2008»
13 years 8 months ago
Counter braids: a novel counter architecture for per-flow measurement
Fine-grained network measurement requires routers and switches to update large arrays of counters at very high link speed (e.g. 40 Gbps). A naive algorithm needs an infeasible amo...
Yi Lu, Andrea Montanari, Balaji Prabhakar, Sarang ...
JSAC
2011
116views more  JSAC 2011»
13 years 3 months ago
Low Complexity Outage Optimal Distributed Channel Allocation for Vehicle-to-Vehicle Communications
—Due to the potential of enhancing traffic safety, protecting environment, and enabling new applications, vehicular communications, especially vehicle-to-vehicle (V2V) communica...
Bo Bai, Wei Chen, Khaled Ben Letaief, Zhigang Cao