158 search results - page 17 / 32 » Parallel Biological Sequence Comparison Using Prefix Computa... |
BCB
2010
13 years 3 months ago
2010
Many biologically motivated problems are expressed as dynamic programming recurrences and are difficult to parallelize due to the intrinsic data dependencies in their algorithms. ...
SC
2003
ACM
14 years 1 months ago
2003
ACM
This paper presents a novel, parallel algorithm for generating top alignments. Top alignments are used for finding internal repeats in biological sequences like proteins and gene...
DILS
2005
Springer
14 years 1 months ago
2005
Springer
We have been developing a system for comparing multiple genomes, PLATCOM, where users can choose genomes of their choice freely and perform analysis of the selected genomes with a...
BMCBI
2002
13 years 8 months ago
2002
Background: Recently, Almeida and Vinga offered a new approach for the representation of arbitrary discrete sequences, referred to as Universal Sequence Maps (USM), and discussed ...
BMCBI
2007
13 years 8 months ago
2007
Background: To date more than 2,1 million gene products from more than 100000 different species have been described specifying their function, the processes they are involved in a...