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    » Pathway level analysis of gene expression using singular val...
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    SDM
    2004
    SIAM
    187views Data Mining» more  SDM 2004»
    Minimum Sum-Squared Residue Co-Clustering of Gene Expression Data
    13 years 8 months ago
    Minimum Sum-Squared Residue Co-Clustering of Gene Expression Data
    Download  www.cs.utexas.edu
    Microarray experiments have been extensively used for simultaneously measuring DNA expression levels of thousands of genes in genome research. A key step in the analysis of gene e...
    Hyuk Cho, Inderjit S. Dhillon, Yuqiang Guan, Suvri...
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    NAR
    2007
    135views more  NAR 2007»
    g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
    13 years 7 months ago
    g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
    Download  emu.at.mt.ut.ee
    g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
    Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
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    BMCBI
    2007
    129views more  BMCBI 2007»
    Integrated network reconstruction, visualization and analysis using YANAsquare
    13 years 7 months ago
    Integrated network reconstruction, visualization and analysis using YANAsquare
    Download  www.biomedcentral.com
    Background: Modeling of metabolic networks includes tasks such as network assembly, network overview, calculation of metabolic fluxes and testing the robustness of the network. Re...
    Roland Schwarz, Chunguang Liang, Christoph Kaleta,...
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    SAC
    2004
    ACM
    132views Applied Computing» more  SAC 2004»
    Time-frequency feature detection for time-course microarray data
    14 years 27 days ago
    Time-frequency feature detection for time-course microarray data
    Download  cs.nyu.edu
    Gene clustering based on microarray data provides useful functional information to the working biologists. Many current gene-clustering algorithms rely on Euclidean-based distance...
    Jiawu Feng, Paolo Emilio Barbano, Bud Mishra
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    BMCBI
    2006
    190views more  BMCBI 2006»
    SNPs3D: Candidate gene and SNP selection for association studies
    13 years 7 months ago
    SNPs3D: Candidate gene and SNP selection for association studies
    Download  moult.ibbr.umd.edu
    Background: The relationship between disease susceptibility and genetic variation is complex, and many different types of data are relevant. We describe a web resource and databas...
    Peng Yue, Eugene Melamud, John Moult
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