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» Patterns for decoupling data structures and algorithms
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ICDE
2004
IEEE
137views Database» more  ICDE 2004»
14 years 9 months ago
Selectivity Estimation for XML Twigs
Twig queries represent the building blocks of declarative query languages over XML data. A twig query describes a complex traversal of the document graph and generates a set of el...
Neoklis Polyzotis, Minos N. Garofalakis, Yannis E....
BMCBI
2008
179views more  BMCBI 2008»
13 years 7 months ago
Bayesian modeling of recombination events in bacterial populations
Background: We consider the discovery of recombinant segments jointly with their origins within multilocus DNA sequences from bacteria representing heterogeneous populations of fa...
Pekka Marttinen, Adam Baldwin, William P. Hanage, ...
BMCBI
2010
155views more  BMCBI 2010»
13 years 7 months ago
A flexible R package for nonnegative matrix factorization
Background: Nonnegative Matrix Factorization (NMF) is an unsupervised learning technique that has been applied successfully in several fields, including signal processing, face re...
Renaud Gaujoux, Cathal Seoighe
ICCAD
1999
IEEE
148views Hardware» more  ICCAD 1999»
14 years 2 days ago
SAT based ATPG using fast justification and propagation in the implication graph
In this paper we present new methods for fast justification and propagation in the implication graph (IG) which is the core data structure of our SAT based implication engine. As ...
Paul Tafertshofer, Andreas Ganz
RECOMB
2004
Springer
14 years 8 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler